Ahmed DW, Tan ML, Liu Y, Gabbard J, Gao E, Roy A, Hu MM, Midekssa FS, Stevens M, Wuchu F, Nenwani M, Xia J, Abraham A, Nagrath D, Han L, Zemans RL, Baker BM, Loebel C. Local photocrosslinking of native tissue matrix regulates lung epithelial cell mechanosensing and function. Nature Materials. 2025. doi: 10.1038/s41563-025-02329-0.

Ifergan-Azriel L, Bar-Am O, Saar G, Cohen T, Loebel C, Burdick JA, Seliktar D. Interpenetrating Polymer Network Hydrogel Composition Alters Encapsulated MSC Spreading and In Vivo Degradation Behavior. ACS Biomaterials Science & Engineering. 2025

Tan ML, Roy A, Plaster EM, Wolfenson H, Abraham A, Loebel C. Hydrogel viscoelasticity modulates cell nascent extracellular matrix deposition, in press at Macromolecular Rapid Communications

Shi, A, Loebel C. An in vitro model for studying crosstalk between muscle cells and neurons. Device, Volume 3, Issue 1, 100655, 2025

Wang C, Fan M, Heo SC, Adams SM, Li T, Liu Y, Li Q, Loebel C, Burdick JA, Lu XK, Birk DE, Alisafaei F, Mauck RL, Han L, Structure, Mechanics, and Mechanobiology of Fibrocartilage Pericellular Matrix Mediated by Type V Collagen. Adv. Sci. e14750, 2025

Childs CJ, Poling HM, Chen K, Tsai YH, Wu A, Vallie A, Eiken MK, Huang S, Sweet CW, Schreiner R, Xiao Z, Spencer RC, Paris SA, Conchola AS, Villanueva JW, Anderman MF, Holloway EM, Singh A, Giger RA, Mahe MM, Loebel C, Helmrath MA, Walton KD, Rafii S, Spence JR. Coordinated differentiation of human intestinal organoids with functional enteric neurons and vasculature. Cell Stem Cell 32 (4), 640-651. e9, 2025

Mareike Lehmann, Ramaswamy Krishnan, Jennifer Sucre, Hrishikesh S Kulkarni, Ricardo H Pineda, Christopher Anderson, Nicholas E Banovich, Holger P Behrsing, Charlotte H Dean, Andrew Haak, Reinoud Gosens, Naftali Kaminski, Anna Zagorska, Cynthia Koziol-White, Jordan P Metcalf, Yong Ho Kim, Claudia Loebel, Enid Neptune, Alexandra Noel, Ganesh Raghu, Katherina Sewald, Ashish Sharma, Bela Suki, Anne Sperling, Amanda Tatler, Scott Turner, Ivan O Rosas, Pam van Ry, Timo Wille, Scott H Randell, Gloria Pryhuber, Mauricio Rojas, Jane Bourke, Melanie KönigshoffPrecision Cut Lung Slices: Emerging Tools for Preclinical and Translational Lung Research. An Official American Thoracic Society Workshop Report, American Journal of Respiratory Cell and Molecular Biology

Daniel C Stewart, Becky K Brisson, Bassil Dekky, Ashton C Berger, William Yen, Elizabeth A Mauldin, Claudia Loebel, Deborah Gillette, Charles-Antoine Assenmacher, Corisa Quincey, Darko Stefanovski, Massimo Cristofanilli, Edna Cukierman, Jason A Burdick, Virginia F Borges, Susan W Volk Prognostic and therapeutic implications of tumor-restrictive type III collagen in the breast cancer microenvironment, NPJ Breast Cancer, 10(1) 86

Katherine Wei, Avinava Roy, Sonia Ejike, Madeline K Eiken, Eleanor M Plaster, Alan Shi, Max Shtein, Claudia Loebel, Magnetoactive, Kirigami-Inspired Hammocks to Probe Lung Epithelial Cell Function

Ahmed DW, Eiken MK, DePalma SJ, Helms AS, Zemans RL, Spence JR, Baker BM, Loebel C. Integrating mechanical cues with engineered platforms to explore cardiopulmonary development and disease. iScience. 2023 108472.

Plaster EM, Eiken MK, Loebel C. DMTMM-Mediated Synthesis of Norbornene-Modified Hyaluronic Acid Polymers to Probe Cell-Hydrogel Interactions. Carbohydr. Polym. Technol. Appl., 6 100360, 2023.

Guimaraes PPG, Figueroa-Espada CG, Riley RS, Gong N, Xue L, Sewastianik T, Dennis PS, Loebel C, Chung A, Shepherd SJ, Haley RM, Hamilton AG, El-Mayta R, Wang K, Langer R, Anderson DG, Carrasco RD, Mitchell MJ. In vivo bone marrow microenvironment sirRNA delivery using lipid-polymer nanoparticles for multiple myeloma therapy. PNAS 120 (25) e2215711120, 2023.

Goldshmid R, Simaan-Yameen H, Ifergan L, Loebel C, Burdick JA, Seliktar D. Modulus-dependent effects on neurogenic, myogenic, and chondrogenic differentiation of human mesenchymal stem cells in three-dimensional hydrogel cultures. J Biomed Mater Res. 2023; 1- 18.

Roy, A., Zhang, Z., Eiken, M.K., Shi, A., Pena-Francesch, A. and Loebel, C. Programmable Tissue Folding Patterns in Structured Hydrogels. Adv. Mater. 2300017, 2023.

Shiraishi, K.; Shah, P.P.; Morley, M.P.; Loebel, C.; Santini, G.T.; Katzen, J.; Basil, M.C.; Lin, S.MJ.D. Planer, J.D.; Cantu, ED.L. Jones, D.L.; Nottingham, A.N.; Li, S.; Cardenas-Diaz, F.L.; Zhou, S.; Burdick, J.A.; Jain, R.; Morrisey, E.E., Biophysical forces mediated by respiration maintain lung alveolar epithelial cell fate, Cell 186, 1478–1492, 2023.

Childs, C.J.; Holloway, E.M.; Sweet, C.W.; Tsai, Y.-H.; Wu, A.; Vallie, A.; Eiken, M.K.; Capeling, M.M.; Zwick, R.K.; Palikuqi, B.; Trentesaux, C.; Wu, J.H.; Pellón-Cardenas, O.; Zhang, C.JI. Glass, I.; Loebel, C.; Yu, Q.; Camp, J.G.; Sexton, J.Z.; Klein, O.D.; Verzi, M.P.; Spence, J.R., EPIREGULIN creates a developmental niche for spatially organized human intestinal enteroids, JCI Insight 8(6), 2023.

Heo, S.-J.; Thakur, S.; Chen X.; Loebel, C.; Xia, X.; McBeath, R.; Burdick, J.A.; Shenoy, V.B.; Mauck, R.L.; Lakadamyali, M., Aberrant chromatin reorganization in cells from diseased fibrous connective tissue in response to altered chemomechanical cues, Nature Biomedical Engineering 7(2) 177-191, 2023.

Loebel, C., Weiner, A.I., Meiken, M.K., Katzen, J.B., Morley, M.P., Bala, V., Cardenas-Diaz, F.L., Davidson, M.D., Shiraishi, K., Basil, M.C., Spence, J.R., Ochs, M., Beers, M.F., Morrisey, E.E., Vaughan, A.E., Burdick, J.A. (2022) Microstructured hydrogels to guide self-assembly and function of lung alveolospheres, Advanced Materials, 34(28):2202992.

Loebel, C., Saleh, A.M., Jacobson K.r., Daniels, R., Mauck, R.L., Calve, S., Burdick, J.A. Metabolic labelling of secreted matrix to investigate cell-material interactions in tissue engineering and mechanobiology. Nature Protocols, 17:618-648, 2022.

Yang, B., Wei, K., Loebel, C., Zhang, K., Feng, Q., Li, R., Wong, D.S., Xu, X., Lau, C., Chen, X., Zhao, P., Yin, C., Burdick, J.A., Wang, Y., Bian, L., (2021) Enhanced mechanosensing of cells in synthetic 3D matrix with controlled biophysical dynamics, Nature Communications, 12:3514.

Patel, J.M., Loebel, C., Saleh, K.S., Wise, B.C., Bonnevie, E.D., Miller, L.M., Carey, J.L., Burdick, J.A., Mauck, R.L. (2021) Stabilization of Damaged Articular Cartilage with Hydrogel-mediated Reinforcement and Sealing, Advanced Healthcare Materials, 10(10):2170049.

Zepp, J.A., Morley, M.P., Loebel, C., Kremp, M.M., Chaudhry, F.N., Basil, M.C., Leach, J.P., Liberti, D.C., Niethamer, T.K., Ying, Y., Jayachandran, S., Babu, AS. Zhou, S., Frank, D.B., Burdick, J.A., Morrisey, E.E. (2021) Genomic, Epigenomic, and Biophysical Cues Controlling the Emergence of the Lung Alveolus, Science, 371: 6534, eabc3172.

Cosgrove, B.D., Loebel, C., Driscoll, T.P., Tsinman, T.K., Dai, E.N., Heo, S.J., Dyment, N.A., Burdick, J.A., Mauck, R.L. (2021) Nuclear Envelope Wrinkling Predicts Mesenchymal Progenitor Cell Mechano-Response in 2D and 3D Microenvironments, Biomaterials, 270:120662.

Loebel, C.*; Kwon, M.*; Wang, C.; Han, L.; Mauck, R.L.; Burdick, J.A. (2020) Metabolic labeling to probe temporal changes in the pericellular matrix at the cell-hydrogel interface. Advanced Functional Materials, 30:1909802 *equal contribution

Loebel, C.; Mauck, R.L.; and Burdick, J.A. (2019) Local nascent protein deposition and remodeling guide mesenchymal stromal cell mechanosensing and fate in three-dimensional hydrogels. Nature Materials, 18, 883-891

Loebel, C.; Ayoub A.; Galarraga J.H.; Kossover, O.; Simaan-Yameen, H.; Seliktar, D.; Burdick, J.A. (2019) Tailoring supramolecular guest-host hydrogel viscoelasticity with covalent fibrinogen double networks. Journal of Materials Chemistry B, 7, 1753-1760

Loebel, C. and Burdick, J.A. (2018) Engineering Stem and Stromal Cell Therapies for Musculoskeletal Tissue Repair. Cell Stem Cell, 22, 325-339

Loebel, C.*; Rodell, C.B.*; Chen, M.H.; Burdick, J.A. (2017) Shear-thinning and self-healing hydrogels as injectable therapeutics and for 3D-printing. Nature Protocols, 12(8), 1521-1541 *equal contribution

Loebel, C.; Szczesny, S. E.; Cosgrove, B. D.; Alini, M.; Zenobi-Wong, M.; Mauck, R. L.; Eglin, D. (2017) Crosslinking Chemistry of Tyramine-Modified Hyaluronan Hydrogels Alters Mesenchymal Stem Cell Early Attachment and Behavior. Biomacromolecules, 18(3), 855-864

Loebel, C.; Stauber, T.; D'Este, M.; Alini, M.; Zenobi-Wong, M.; Eglin, D. (2017) Fabrication of cell-compatible hyaluronan hydrogels with a wide range of biophysical properties through high tyramine functionalization. Journal of Materials Chemistry A, 5(12), 2355-2363

Li, B.; Menzel, U.; Loebel, C.; Schmal, H.; Alini, M.; Stoddart, M. J. (2016) Monitoring live human mesenchymal stromal cell differentiation and subsequent selection using fluorescent RNA-based probes. Scientific Reports, 6, 26014

Loebel, C.*; Broguiere, N.*; Alini, M.; Zenobi-Wong, M.; Eglin, D. (2015) Microfabrication of Photo-Cross-Linked Hyaluronan Hydrogels by Single- and Two-Photon Tyramine Oxidation. Biomacromolecules, 16(9), 2624-30 *equal contribution

Voss, J. O.; Loebel, C.; Bara, J. J.; Fussinger, M.A.; Duttenhoefer, F.; Alini, M.; Stoddart, M.J. (2015) Effect of Short-Term Stimulation with Interleukin-1beta and Differentiation Medium on Human Mesenchymal Stromal Cell Paracrine Activity in Coculture with Osteoblasts. BioMed Research International, 714230

Loebel, C.; D'Este, M.; Alini, M.; Zenobi-Wong, M.; Eglin, D. (2015) Precise tailoring of tyramine-based hyaluronan hydrogel properties using DMTMM conjugation. Carbohydrate Polymers, 115, 325-33

Loebel, C.; Czekanska, E.M.; Bruderer, M.; Salzmann, G.; Alini, M.; Stoddart, M.J. (2014) In vitro osteogenic potential of human mesenchymal stem cells is predicted by Runx2/Sox9 ratio. Tissue Engineering Part A, 21(1-2), 115-23

Loebel, C.; Czekanska, E.M.; Staudacher, J.; Salzmann, G.; Richards, R.G.; Alini, M.; Stoddart, M. J. (2014) The calcification potential of human MSCs can be enhanced by interleukin-1beta in osteogenic medium. Journal of Tissue Engineering and Regenerative Medicine, 11(2), 564-571